STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_0832Conserved hypothetical protein. (217 aa)    
Predicted Functional Partners:
SRU_0831
Conserved hypothetical protein.
       0.592
SRU_0501
Conserved hypothetical protein.
  
     0.463
SRU_2579
Sensory rhodopsin (SRI); Identified by similarity to SP:P33743; match to protein family HMM PF01036.
  
     0.460
SRU_2511
Sensory rhodopsin (SRI); Identified by similarity to SP:P33743; match to protein family HMM PF01036.
  
     0.448
SRU_2780
Halorhodopsin (HR); Identified by similarity to SP:P33742; match to protein family HMM PF01036.
  
     0.403
SRU_0948
Hydrolase, alpha/beta fold family protein.
  
     0.401
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.