Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SRU_0922 | SRU_1123 | SRU_0922 | SRU_1123 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 0.933 |
| SRU_0922 | SRU_1161 | SRU_0922 | SRU_1161 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.951 |
| SRU_0922 | SRU_1368 | SRU_0922 | SRU_1368 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.902 |
| SRU_0922 | SRU_2363 | SRU_0922 | SRU_2363 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Cys/Met metabolism PLP-dependent enzyme superfamily; Identified by match to protein family HMM PF01053. | 0.951 |
| SRU_0922 | SRU_2787 | SRU_0922 | SRU_2787 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Cysteine synthase B; Identified by match to protein family HMM PF00291. | 0.906 |
| SRU_0922 | ahcY | SRU_0922 | SRU_1139 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.961 |
| SRU_0922 | metE | SRU_0922 | SRU_1269 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.900 |
| SRU_0922 | metK | SRU_0922 | SRU_2755 | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.968 |
| SRU_1123 | SRU_0922 | SRU_1123 | SRU_0922 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | 0.933 |
| SRU_1123 | SRU_1161 | SRU_1123 | SRU_1161 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.992 |
| SRU_1123 | SRU_1368 | SRU_1123 | SRU_1368 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.990 |
| SRU_1123 | SRU_2363 | SRU_1123 | SRU_2363 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Cys/Met metabolism PLP-dependent enzyme superfamily; Identified by match to protein family HMM PF01053. | 0.994 |
| SRU_1123 | SRU_2787 | SRU_1123 | SRU_2787 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Cysteine synthase B; Identified by match to protein family HMM PF00291. | 0.925 |
| SRU_1123 | ahcY | SRU_1123 | SRU_1139 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.938 |
| SRU_1123 | metE | SRU_1123 | SRU_1269 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.933 |
| SRU_1123 | metK | SRU_1123 | SRU_2755 | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.495 |
| SRU_1161 | SRU_0922 | SRU_1161 | SRU_0922 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | Truncated methionine synthase-like protein; Identified by match to protein family HMM PF01717. | 0.951 |
| SRU_1161 | SRU_1123 | SRU_1161 | SRU_1123 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 0.992 |
| SRU_1161 | SRU_1368 | SRU_1161 | SRU_1368 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.915 |
| SRU_1161 | SRU_2363 | SRU_1161 | SRU_2363 | Cystathionine beta-lyase MetC; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. | Cys/Met metabolism PLP-dependent enzyme superfamily; Identified by match to protein family HMM PF01053. | 0.906 |
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