Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SRU_0938 | citA | SRU_0938 | SRU_0488 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Citrate synthase; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family. | 0.857 |
| SRU_0938 | fumC | SRU_0938 | SRU_1611 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.825 |
| SRU_0938 | gltB | SRU_0938 | SRU_1169 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.946 |
| SRU_0938 | mdh | SRU_0938 | SRU_1571 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.917 |
| SRU_0938 | pckA | SRU_0938 | SRU_1835 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.817 |
| SRU_0938 | pckA-2 | SRU_0938 | SRU_2373 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.817 |
| SRU_0938 | pycA | SRU_0938 | SRU_0828 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Pyruvate carboxylase; Identified by match to protein family HMM PF00364. | 0.803 |
| SRU_1786 | SRU_1791 | SRU_1786 | SRU_1791 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. | 0.551 |
| SRU_1786 | citA | SRU_1786 | SRU_0488 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Citrate synthase; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family. | 0.957 |
| SRU_1786 | fumC | SRU_1786 | SRU_1611 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.961 |
| SRU_1786 | gltB | SRU_1786 | SRU_1169 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.485 |
| SRU_1786 | mdh | SRU_1786 | SRU_1571 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.959 |
| SRU_1786 | pckA | SRU_1786 | SRU_1835 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.588 |
| SRU_1786 | pckA-2 | SRU_1786 | SRU_2373 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.588 |
| SRU_1786 | ppc | SRU_1786 | SRU_0093 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.417 |
| SRU_1786 | pycA | SRU_1786 | SRU_0828 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | Pyruvate carboxylase; Identified by match to protein family HMM PF00364. | 0.912 |
| SRU_1791 | SRU_1786 | SRU_1791 | SRU_1786 | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949. | 0.551 |
| SRU_1791 | citA | SRU_1791 | SRU_0488 | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. | Citrate synthase; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family. | 0.867 |
| SRU_1791 | mdh | SRU_1791 | SRU_1571 | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.862 |
| SRU_1791 | pckA | SRU_1791 | SRU_1835 | Methylmalonyl-CoA mutase superfamily; Identified by match to protein family HMM PF01642. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.860 |
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