STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_1695NADH dehydrogenase, putative; Identified by match to protein family HMM PF00361; match to protein family HMM PF00499; match to protein family HMM PF00662. (794 aa)    
Predicted Functional Partners:
nuoI
NADH dehydrogenase i, i subunit; Identified by match to protein family HMM PF00037.
  
 
 0.999
SRU_1691
Na+/H+ ion antiporter subunit family; Identified by match to protein family HMM PF01899.
 
 
 0.999
SRU_1692
NADH-Ubiquinone/plastoquinone (complex I), various chains domain protein; Identified by match to protein family HMM PF00361.
 
 
0.999
SRU_1693
Cation transport system protein, putative; Identified by match to protein family HMM PF00420.
 
 
 0.999
SRU_1696
Monovalent cation/proton antiporter, MnhG/PhaG subunit subfamily; Identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300.
 
 
 0.999
SRU_1694
Domain putative MnhB subunit of Na+/H+ antiporter superfamily; Identified by match to protein family HMM PF04039.
 
 0.998
SRU_1697
pH adaptation potassium efflux system phaF, putative; Identified by match to protein family HMM PF04066.
 
 
 0.997
nuoB
NADH-quinone oxidoreductase chain b; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 
 0.988
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
 
 
 0.988
nuoC
NADH-quinone oxidoreductase chain c/d; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
  
 
 0.986
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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