SRU_1797 protein (Salinibacter ruber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

SRU_1797

PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639. (685 aa)

Predicted Functional Partners:

SRU_1799

0.886

SRU_1798

0.801

SRU_1860

0.732

SRU_0885

0.698

SRU_2676

0.694

SRU_1850

0.692

SRU_1812

0.654

SRU_1028

0.636

SRU_2117

0.620

SRU_2538

0.585

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SRU_0885	SRU_1028	Hypothetical protein; Identified by Glimmer2; putative.	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.437
SRU_0885	SRU_1797	Hypothetical protein; Identified by Glimmer2; putative.	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	0.698
SRU_0885	SRU_1860	Hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.775
SRU_0885	SRU_2117	Hypothetical protein; Identified by Glimmer2; putative.	Outer membrane protein, OMP85 family, putative; Identified by match to protein family HMM PF01103.	0.768
SRU_0885	SRU_2538	Hypothetical protein; Identified by Glimmer2; putative.	TonB-dependent receptor domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.750
SRU_1028	SRU_0885	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Hypothetical protein; Identified by Glimmer2; putative.	0.437
SRU_1028	SRU_1797	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	0.636
SRU_1028	SRU_1798	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Hypothetical protein; Identified by Glimmer2; putative.	0.435
SRU_1028	SRU_1799	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Peptidylprolyl cis-trans isomerase; Identified by match to protein family HMM PF00639.	0.629
SRU_1028	SRU_1812	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Hypothetical protein; Identified by Glimmer2; putative.	0.713
SRU_1028	SRU_1850	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat domain protein.	0.731
SRU_1028	SRU_1860	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Hypothetical protein; Identified by Glimmer2; putative.	0.498
SRU_1028	SRU_2538	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	TonB-dependent receptor domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.661
SRU_1797	SRU_0885	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Hypothetical protein; Identified by Glimmer2; putative.	0.698
SRU_1797	SRU_1028	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Tetratricopeptide repeat family; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.636
SRU_1797	SRU_1798	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Hypothetical protein; Identified by Glimmer2; putative.	0.801
SRU_1797	SRU_1799	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Peptidylprolyl cis-trans isomerase; Identified by match to protein family HMM PF00639.	0.886
SRU_1797	SRU_1812	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Hypothetical protein; Identified by Glimmer2; putative.	0.654
SRU_1797	SRU_1850	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Tetratricopeptide repeat domain protein.	0.692
SRU_1797	SRU_1860	PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.	Hypothetical protein; Identified by Glimmer2; putative.	0.732