SRU_2086 protein (Salinibacter ruber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SRU_2086

Identified by match to protein family HMM PF00753. (216 aa)

Predicted Functional Partners:

SRU_0326

0.938

SRU_2344

0.901

SRU_2087

0.511

ybeY

0.454

SRU_2723

0.448

SRU_2042

0.441

rsmI

0.427

SRU_0317

0.423

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRU_0317	SRU_0326	SRU_0317	SRU_0326	Putative filamentous hemagglutinin; Identified by match to protein family HMM PF07992.	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	0.736
SRU_0317	SRU_2086	SRU_0317	SRU_2086	Putative filamentous hemagglutinin; Identified by match to protein family HMM PF07992.	Identified by match to protein family HMM PF00753.	0.423
SRU_0326	SRU_0317	SRU_0326	SRU_0317	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	Putative filamentous hemagglutinin; Identified by match to protein family HMM PF07992.	0.736
SRU_0326	SRU_2042	SRU_0326	SRU_2042	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	MoeZ/MoeB domain family; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.	0.601
SRU_0326	SRU_2086	SRU_0326	SRU_2086	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	Identified by match to protein family HMM PF00753.	0.938
SRU_0326	SRU_2344	SRU_0326	SRU_2344	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	Identified by match to protein family HMM PF00903.	0.911
SRU_0326	ybeY	SRU_0326	SRU_2092	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.948
SRU_2042	SRU_0326	SRU_2042	SRU_0326	MoeZ/MoeB domain family; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	0.601
SRU_2042	SRU_2086	SRU_2042	SRU_2086	MoeZ/MoeB domain family; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.	Identified by match to protein family HMM PF00753.	0.441
SRU_2042	ybeY	SRU_2042	SRU_2092	MoeZ/MoeB domain family; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.708
SRU_2086	SRU_0317	SRU_2086	SRU_0317	Identified by match to protein family HMM PF00753.	Putative filamentous hemagglutinin; Identified by match to protein family HMM PF07992.	0.423
SRU_2086	SRU_0326	SRU_2086	SRU_0326	Identified by match to protein family HMM PF00753.	Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.	0.938
SRU_2086	SRU_2042	SRU_2086	SRU_2042	Identified by match to protein family HMM PF00753.	MoeZ/MoeB domain family; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.	0.441
SRU_2086	SRU_2087	SRU_2086	SRU_2087	Identified by match to protein family HMM PF00753.	Membrane protein, putative; Identified by match to protein family HMM PF03739.	0.511
SRU_2086	SRU_2344	SRU_2086	SRU_2344	Identified by match to protein family HMM PF00753.	Identified by match to protein family HMM PF00903.	0.901
SRU_2086	SRU_2723	SRU_2086	SRU_2723	Identified by match to protein family HMM PF00753.	Conserved hypothetical protein.	0.448
SRU_2086	rsmI	SRU_2086	SRU_2088	Identified by match to protein family HMM PF00753.	Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.427
SRU_2086	ybeY	SRU_2086	SRU_2092	Identified by match to protein family HMM PF00753.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.454
SRU_2087	SRU_2086	SRU_2087	SRU_2086	Membrane protein, putative; Identified by match to protein family HMM PF03739.	Identified by match to protein family HMM PF00753.	0.511
SRU_2087	rsmI	SRU_2087	SRU_2088	Membrane protein, putative; Identified by match to protein family HMM PF03739.	Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.618