STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_2104Conserved hypothetical protein. (201 aa)    
Predicted Functional Partners:
SRU_2105
Polysulfide reductase chain C; Identified by match to protein family HMM PF03916.
 
 
 0.999
SRU_2103
Conserved hypothetical protein.
 
 
 0.998
SRU_2106
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Identified by match to protein family HMM PF00037.
 
 
 0.995
SRU_2102
Molybdopterin oxidoreductase membrane subunit, putative.
 
 
 0.993
SRU_2107
Conserved hypothetical protein.
 
 
 
 0.991
coxB1
Cytochrome oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.989
SRU_2098
Conserved hypothetical protein.
 
 
 0.970
SRU_1811
Hypothetical protein; Identified by Glimmer2; putative.
    
   0.939
SRU_2097
Caa(3)-type oxidase, subunit IV subfamily, putative; Identified by match to protein family HMM TIGR02229.
 
 
 
 0.930
SRU_0323
Cytochrome c oxidase, cbb3-type, subunit II; Identified by match to protein family HMM PF02433.
  
 
 0.919
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.