STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_2203GDSL-like lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. (575 aa)    
Predicted Functional Partners:
SRU_0696
Putative permease domain protein; Identified by match to protein family HMM PF02687.
 
     0.810
SRU_0768
Esterase/lipase, putative.
 
   
 0.632
SRU_2467
BNR repeat, putative.
  
   0.558
SRU_2202
Phospho-sugar mutase, putative; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
  
  
 0.544
SRU_0068
Peptidase, M48 family; Identified by match to protein family HMM PF01435.
  
     0.536
SRU_0372
beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00144; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM TIGR01409; Belongs to the glycosyl hydrolase 3 family.
     
 0.456
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.