STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkH2TrkH potassium uptake protein; Identified by similarity to GB:AAV45748.1; match to protein family HMM PF02386. (499 aa)    
Predicted Functional Partners:
trkA4
Trk system potassium uptake protein; Identified by similarity to GB:AAV46455.1; match to protein family HMM PF02080; match to protein family HMM PF02254.
 
 
 0.970
trkA
TRK potassium uptake system protein; Identified by match to protein family HMM PF02254.
 
 
 0.876
trkA1
Trk potassium uptake system protein; Identified by similarity to GB:AAV45302.1; match to protein family HMM PF02080; match to protein family HMM PF02254.
 
 
 0.876
SRU_0855
TRK potassium uptake system protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
 
 
 0.875
SRU_2256
Transporter, monovalent cation:proton antiporter-2 (CPA2) family; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.836
SRU_2272
Potassium efflux system protein, putative; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.786
SRU_2273
Potassium-efflux system protein, putative; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.786
cat5
Cationic amino acid transporter; Identified by similarity to PIR:F84279; match to protein family HMM PF00324; match to protein family HMM PF02080.
  
 
 0.762
SRU_0409
Potassium channel, putative; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF07885.
  
 
 0.464
SRU_1255
Trk active potasium channel; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
  
 
 0.464
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.