STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_2272Potassium efflux system protein, putative; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (542 aa)    
Predicted Functional Partners:
SRU_2273
Potassium-efflux system protein, putative; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
0.866
trkH2
TrkH potassium uptake protein; Identified by similarity to GB:AAV45748.1; match to protein family HMM PF02386.
  
 
 0.786
SRU_1329
Putative potassium-efflux system protein; Identified by match to protein family HMM PF00999.
 
     0.775
trkH1
TrkH potassium uptake protein; Identified by match to protein family HMM PF02386.
  
 
 0.728
cat5
Cationic amino acid transporter; Identified by similarity to PIR:F84279; match to protein family HMM PF00324; match to protein family HMM PF02080.
   
 
 0.672
flgG
Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02488.
    
   0.661
flgG-2
Flagellar basal-body rod protein; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429.
    
   0.661
cat4
Cationic amino acid transporter; Identified by match to protein family HMM PF00324.
     
 0.546
SRU_2256
Transporter, monovalent cation:proton antiporter-2 (CPA2) family; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.544
SRU_0144
Putative redox sensing protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
   
 0.543
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.