STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_2393Sensor histidine kinase, possible pleC; Identified by match to protein family HMM PF00512; match to protein family HMM PF01336; match to protein family HMM TIGR00229. (580 aa)    
Predicted Functional Partners:
SRU_2394
Sensor kinase protein rcsC; Identified by match to protein family HMM PF02518.
 
     0.853
SRU_0836
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518.
 
 
 
 0.828
SRU_0354
Sensor histidine kinase; Identified by match to protein family HMM PF02518.
 
     0.767
SRU_1122
FixL-related histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
   0.756
SRU_2790
Response regulator receiver:histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
   0.754
SRU_2831
Two-component sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
 
   0.744
SRU_1535
Response regulator; Identified by match to protein family HMM PF00072.
 
 
 0.720
SRU_0472
Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.703
SRU_0854
Mutant NtrC-like activator; Identified by match to protein family HMM PF00072.
 
   0.703
SRU_2062
Sensory box sensor histidine kianse/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.695
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.