STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliGFlagellar motor switch protein FliG; Identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207. (349 aa)    
Predicted Functional Partners:
SRU_2590
Possible flagellar motor switch FliN; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480.
 
 0.999
fliM
Flagellar motor switch protein FliM; Identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397.
 0.999
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 0.999
fliI
Flagellar protein export ATPase FliI; Identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545.
 
 0.995
flgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF06429; match to protein family HMM TIGR01395.
 
  
 0.994
flgK
Flagellar hook-associated protein FlgK; Identified by match to protein family HMM PF06429; match to protein family HMM TIGR02492.
 
  
 0.993
motA
Chemotaxis motA protein; Identified by match to protein family HMM PF01618.
 
  
 0.990
SRU_2607
Flagellar biosynthesis cell-distal portion of basal-body rod; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429.
 
  
 0.990
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.989
SRU_2615
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.989
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.