Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SRU_2844 | SRU_2846 | SRU_2844 | SRU_2846 | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.417 |
SRU_2844 | susB | SRU_2844 | SRU_2253 | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | Alpha-glucosidase. | 0.530 |
SRU_2844 | xloA | SRU_2844 | SRU_2845 | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | 0.773 |
SRU_2846 | SRU_2844 | SRU_2846 | SRU_2844 | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | 0.417 |
SRU_2846 | susB | SRU_2846 | SRU_2253 | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Alpha-glucosidase. | 0.430 |
SRU_2846 | xloA | SRU_2846 | SRU_2845 | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | 0.635 |
susB | SRU_2844 | SRU_2253 | SRU_2844 | Alpha-glucosidase. | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | 0.530 |
susB | SRU_2846 | SRU_2253 | SRU_2846 | Alpha-glucosidase. | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.430 |
susB | xloA | SRU_2253 | SRU_2845 | Alpha-glucosidase. | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | 0.954 |
xloA | SRU_2844 | SRU_2845 | SRU_2844 | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | Beta-glucanase precursor; Identified by match to protein family HMM PF00722; match to protein family HMM PF00801. | 0.773 |
xloA | SRU_2846 | SRU_2845 | SRU_2846 | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | Sugar transporter subfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.635 |
xloA | susB | SRU_2845 | SRU_2253 | Xylosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. | Alpha-glucosidase. | 0.954 |