STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ11365.1S9 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (761 aa)    
Predicted Functional Partners:
OKZ11364.1
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.
  
    0.762
OKZ11367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.723
purD
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.
  
    0.722
OKZ11384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.718
OKZ05921.1
Serine protease; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
   
 0.661
OKZ05920.1
Serine protease; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
   
 0.660
OKZ09878.1
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
  
 
  0.605
OKZ10953.1
Alkaline phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.559
OKZ12747.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.534
Your Current Organism:
Bacteroides plebeius
NCBI taxonomy Id: 310297
Other names: B. plebeius, Bacteroides plebeius Kitahara et al. 2005, DSM 17135, JCM 12973, strain M12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.