STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ10681.1Hemolysin activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
OKZ07485.1
Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.912
OKZ10682.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.856
OKZ10680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
OKZ10683.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.754
OKZ05477.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
OKZ10384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
OKZ10684.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.659
OKZ10383.1
Peptidase M75; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
OKZ10678.1
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.626
OKZ10679.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.601
Your Current Organism:
Bacteroides plebeius
NCBI taxonomy Id: 310297
Other names: B. plebeius, Bacteroides plebeius Kitahara et al. 2005, DSM 17135, JCM 12973, strain M12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.