STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ08394.1Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa)    
Predicted Functional Partners:
OKZ12514.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.886
OKZ12843.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.883
pulA
Type I pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.883
OKZ12513.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.863
OKZ12516.1
Starch-binding outer membrane protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.727
OKZ11135.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.678
OKZ12175.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.669
OKZ12603.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.668
OKZ12515.1
SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
OKZ10497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.493
Your Current Organism:
Bacteroides plebeius
NCBI taxonomy Id: 310297
Other names: B. plebeius, Bacteroides plebeius Kitahara et al. 2005, DSM 17135, JCM 12973, strain M12
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.