STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079262ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. (845 aa)    
Predicted Functional Partners:
grm1
Glutamate receptor, metabotropic 1a.
   
  0.903
LOC101071408
Glutamate receptor, metabotropic 1b.
   
  0.903
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
  
  
 
0.902
LOC101076070
Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
    
 
 0.654
ARHGEF26
Rho guanine nucleotide exchange factor 26.
      
 0.545
LOC101063973
Ras homolog, mTORC1 binding like 1.
    
 
 0.527
tanc1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b.
    
 0.507
unc5b
Unc-5 netrin receptor B.
    
  0.490
kcnj3
Potassium inwardly-rectifying channel, subfamily J, member 3a.
   
  
 0.465
rheb
Ras homolog, mTORC1 binding.
    
 
 0.460
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.