STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c5h16orf89Si:ch211-76l23.7. (354 aa)    
Predicted Functional Partners:
ENSTRUP00000067820
Transmembrane gamma-carboxyglutamic acid protein 2-like.
      
 0.636
pebp1
Phosphatidylethanolamine binding protein 1.
   
  
 0.520
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.460
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.456
rhbdl2
Rhomboid-related protein 2; Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
      
 0.443
nprl3
NPR3-like, GATOR1 complex subunit.
    
 
 0.439
wdr24
WD repeat domain 24.
    
 
 0.415
wdr59
WD repeat domain 59.
    
   0.408
kptn
Kaptin (actin binding protein).
    
   0.408
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.408
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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