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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evi5Ecotropic viral integration site 5b. (818 aa)    
Predicted Functional Partners:
LOC101064948
TBC1 domain family, member 7.
      
 0.432
mitd1
MIT, microtubule interacting and transport, domain containing 1.
   
  
 0.417
LOC101073928
Uncharacterized protein.
    
 0.409
LOC101074373
Uncharacterized protein.
    
 0.409
rab11a
RAB11a, member RAS oncogene family.
    
 0.409
LOC101073559
RAB11a, member RAS oncogene family, like.
    
 0.409
LOC101065023
Ras-related protein Rab-11B-like.
    
 0.409
TBC1D13
TBC1 domain family member 13.
     
 0.408
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
  
 0.405
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.