Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
evi5Ecotropic viral integration site 5b. (818 aa)    
Predicted Functional Partners:
LOC101064948
TBC1 domain family, member 7.
      
 0.617
mitd1
MIT, microtubule interacting and transport, domain containing 1.
   
  
 0.600
TBC1D13
TBC1 domain family member 13.
      
 0.599
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
  
 0.574
LOC101073928
Uncharacterized protein.
    
 0.559
LOC101074373
Uncharacterized protein.
    
 0.559
rab11a
RAB11a, member RAS oncogene family.
    
 0.559
LOC101073559
RAB11a, member RAS oncogene family, like.
    
 0.559
LOC101065023
Ras-related protein Rab-11B-like.
    
 0.559
tbc1d16
TBC1 domain family, member 16.
      
 0.521
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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