STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077976AFG3-like AAA ATPase 2; Belongs to the AAA ATPase family. (801 aa)    
Predicted Functional Partners:
phb
Prohibitin.
   
 0.873
phb2
Prohibitin.
   
 0.831
ndufa13
NADH:ubiquinone oxidoreductase subunit A13.
   
 
 0.764
timmdc1
Uncharacterized protein.
   
   0.758
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.750
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
0.747
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.712
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.712
Mrps14
28S ribosomal protein S14, mitochondrial.
   
 
 0.710
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.703
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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