STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2RLQ2_TAKRUIg-like domain-containing protein. (422 aa)    
Predicted Functional Partners:
mcph1
Microcephalin 1.
      
 0.622
LOC101066249
Centromere protein J.
      
 0.620
ofd1
OFD1 centriole and centriolar satellite protein.
      
 0.572
aspm
ASH domain-containing protein.
      
 0.551
galc
Galactosylceramidase b.
      
 0.544
med12
Mediator complex subunit 12.
      
 0.520
LOC115246455
Low density lipoprotein receptor class A domain containing 4b.
      
 0.510
rin2
Si:ch211-85n16.4.
      
 0.475
brwd3
Bromodomain and WD repeat domain containing 3.
      
 0.445
phip
Pleckstrin homology domain interacting protein.
      
 0.445
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.