spx protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

spx

Spexin hormone. (120 aa)

Predicted Functional Partners:

LOC101065417

0.991

ENSTRUP00000084906

0.980

LOC101078133

0.955

galr1

0.955

clpx

0.705

clpp

0.674

golt1b

0.673

rfrp

0.673

agrp1

0.666

Gal

0.636

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000084906	Gal	ENSTRUP00000084906	ENSTRUP00000078640	Galanin receptor type 2-like.	Uncharacterized protein.	0.994
ENSTRUP00000084906	LOC101078133	ENSTRUP00000084906	ENSTRUP00000006448	Galanin receptor type 2-like.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.484
ENSTRUP00000084906	galr1	ENSTRUP00000084906	ENSTRUP00000044709	Galanin receptor type 2-like.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.484
ENSTRUP00000084906	spx	ENSTRUP00000084906	ENSTRUP00000001128	Galanin receptor type 2-like.	Spexin hormone.	0.980
Gal	ENSTRUP00000084906	ENSTRUP00000078640	ENSTRUP00000084906	Uncharacterized protein.	Galanin receptor type 2-like.	0.994
Gal	LOC101065417	ENSTRUP00000078640	ENSTRUP00000077124	Uncharacterized protein.	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	0.994
Gal	LOC101078133	ENSTRUP00000078640	ENSTRUP00000006448	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.997
Gal	agrp1	ENSTRUP00000078640	ENSTRUP00000009367	Uncharacterized protein.	Agouti domain-containing protein.	0.693
Gal	galr1	ENSTRUP00000078640	ENSTRUP00000044709	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.998
Gal	spx	ENSTRUP00000078640	ENSTRUP00000001128	Uncharacterized protein.	Spexin hormone.	0.636
LOC101065417	Gal	ENSTRUP00000077124	ENSTRUP00000078640	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.994
LOC101065417	LOC101078133	ENSTRUP00000077124	ENSTRUP00000006448	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.484
LOC101065417	galr1	ENSTRUP00000077124	ENSTRUP00000044709	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.484
LOC101065417	spx	ENSTRUP00000077124	ENSTRUP00000001128	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	Spexin hormone.	0.991
LOC101078133	ENSTRUP00000084906	ENSTRUP00000006448	ENSTRUP00000084906	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Galanin receptor type 2-like.	0.484
LOC101078133	Gal	ENSTRUP00000006448	ENSTRUP00000078640	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.997
LOC101078133	LOC101065417	ENSTRUP00000006448	ENSTRUP00000077124	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.	0.484
LOC101078133	spx	ENSTRUP00000006448	ENSTRUP00000001128	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Spexin hormone.	0.955
agrp1	Gal	ENSTRUP00000009367	ENSTRUP00000078640	Agouti domain-containing protein.	Uncharacterized protein.	0.693
agrp1	spx	ENSTRUP00000009367	ENSTRUP00000001128	Agouti domain-containing protein.	Spexin hormone.	0.666