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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2S5K4_TAKRUUncharacterized protein. (147 aa)    
Predicted Functional Partners:
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.943
psmb2
Proteasome subunit beta.
   
 0.937
psma3
Proteasome subunit alpha type.
   
 0.936
psmb3
Proteasome subunit beta.
   
 0.934
psma5
Proteasome subunit alpha type.
   
 0.930
psma1
Proteasome subunit alpha type.
   
 0.924
LOC101062730
Proteasome subunit alpha type.
   
 0.922
psma4
Proteasome subunit alpha type.
   
 0.921
psmb1
Proteasome subunit beta.
   
 0.906
LOC101074926
Proteasome subunit beta.
 
 0.904
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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