Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYP4F8Cytochrome P450 family 4 subfamily F member 8; Belongs to the cytochrome P450 family. (501 aa)    
Predicted Functional Partners:
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.673
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.613
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.612
LOC101075688
Phosphoethanolamine methyltransferase.
   
 
 0.601
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.587
ENSTRUP00000061623
annotation not available
  
0.558
LOC101069556
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
 0.540
LOC101069124
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.539
LOC101065426
Cytochrome P450, family 20, subfamily A, polypeptide 1.
  
   
 0.518
ENSTRUP00000060342
annotation not available
  
 0.509
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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