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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066261Cathepsin K; Belongs to the peptidase C1 family. (331 aa)    
Predicted Functional Partners:
LOC101075537
Baculoviral IAP repeat containing 2.
   
 
 0.710
LOC101077253
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.666
LOC101064562
Mothers against decapentaplegic homolog.
   
  
 0.663
wnt3a
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.660
LOC101062741
Baculoviral IAP repeat containing 5a.
     
 0.658
LOC101064682
Baculoviral IAP repeat containing 5b.
     
 0.658
H2RZ55_TAKRU
BH4_2 domain-containing protein.
     
 0.657
H2SIR7_TAKRU
BH4_2 domain-containing protein.
     
 0.657
LOC101069689
BH4_2 domain-containing protein.
     
 0.657
ENSTRUP00000036531
Bcl-2-like 1 (apoptosis regulator Bcl-X).
     
 0.657
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.