STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067896Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family. (211 aa)    
Predicted Functional Partners:
ENSTRUP00000054163
Urotensin-related peptide 1.
      
 0.730
LOC101061816
Lens intrinsic membrane protein 2.2.
      
 0.697
Gal
Uncharacterized protein.
      
 0.572
LOC101064246
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.494
LOC101061166
Somatotropin; Growth hormone plays an important role in growth control and is involved in the regulation of several anabolic processes. Implicated as an osmoregulatory substance important for seawater adaptation; Belongs to the somatotropin/prolactin family.
   
  
 0.491
LOC101070289
Somatolactin alpha.
   
    0.487
LOC101066139
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.439
TEX9
Testis-expressed protein 9 isoform X3.
      
 0.430
hs6st3
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.428
cpb2
Carboxypeptidase B2 (plasma).
      
 0.428
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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