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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emc10ER membrane protein complex subunit 10. (256 aa)    
Predicted Functional Partners:
H2RPX4_TAKRU
ER membrane protein complex subunit 6.
    
 0.979
emc7
ER membrane protein complex subunit 7.
   
 0.976
emc1
ER membrane protein complex subunit 1.
   
 0.973
emc8
ER membrane protein complex subunit 8.
    
 0.972
mmgt1
Membrane magnesium transporter 1.
    
 0.967
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.946
LOC101078521
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.943
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.943
emc9
ER membrane protein complex subunit 9.
    
 0.889
ENSTRUP00000083056
Trichohyalin-like isoform X1.
    
   0.776
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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