STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
reep3Receptor expression-enhancing protein. (334 aa)    
Predicted Functional Partners:
reep1-2
Receptor expression-enhancing protein.
    
 
 0.809
aff3
AF4/FMR2 family member 3 isoform X1.
    
 
 0.795
reep2
Receptor expression-enhancing protein.
    
 
 0.791
c2cd2
C2 calcium dependent domain containing 2.
      
 0.701
LOC105417249
Uncharacterized protein.
    
 
 0.701
ENSTRUP00000071887
Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family.
      
 0.695
nbas
Neuroblastoma amplified sequence.
      
 0.670
camsap1
Calmodulin regulated spectrin-associated protein 1b.
      
 0.643
xxylt1
Xyloside xylosyltransferase 1.
      
 0.628
Sgf29
SAGA-associated factor 29.
    
 
 0.623
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.