Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Fancm | LOC101075827 | ENSTRUP00000024507 | ENSTRUP00000017343 | ERCC4 domain-containing protein. | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | 0.574 |
| Fancm | TOP2B | ENSTRUP00000024507 | ENSTRUP00000059112 | ERCC4 domain-containing protein. | DNA topoisomerase II beta. | 0.574 |
| Fancm | blm | ENSTRUP00000024507 | ENSTRUP00000078695 | ERCC4 domain-containing protein. | BLM RecQ like helicase. | 0.999 |
| Fancm | pole | ENSTRUP00000024507 | ENSTRUP00000052888 | ERCC4 domain-containing protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.919 |
| Fancm | recql5 | ENSTRUP00000024507 | ENSTRUP00000020645 | ERCC4 domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.995 |
| Fancm | rnaseh2a | ENSTRUP00000024507 | ENSTRUP00000000114 | ERCC4 domain-containing protein. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.719 |
| Fancm | sumo1 | ENSTRUP00000024507 | ENSTRUP00000061419 | ERCC4 domain-containing protein. | Small ubiquitin-related modifier. | 0.452 |
| Fancm | tdp1 | ENSTRUP00000024507 | ENSTRUP00000015997 | ERCC4 domain-containing protein. | Tyrosyl-DNA phosphodiesterase 1. | 0.791 |
| Fancm | top1 | ENSTRUP00000024507 | ENSTRUP00000001369 | ERCC4 domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.666 |
| Fancm | top2a | ENSTRUP00000024507 | ENSTRUP00000041923 | ERCC4 domain-containing protein. | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | 0.574 |
| LOC101075827 | Fancm | ENSTRUP00000017343 | ENSTRUP00000024507 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | ERCC4 domain-containing protein. | 0.574 |
| LOC101075827 | blm | ENSTRUP00000017343 | ENSTRUP00000078695 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | BLM RecQ like helicase. | 0.707 |
| LOC101075827 | pole | ENSTRUP00000017343 | ENSTRUP00000052888 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.501 |
| LOC101075827 | recql5 | ENSTRUP00000017343 | ENSTRUP00000020645 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.598 |
| LOC101075827 | rnaseh2a | ENSTRUP00000017343 | ENSTRUP00000000114 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.475 |
| LOC101075827 | sumo1 | ENSTRUP00000017343 | ENSTRUP00000061419 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | Small ubiquitin-related modifier. | 0.660 |
| LOC101075827 | tdp1 | ENSTRUP00000017343 | ENSTRUP00000015997 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | Tyrosyl-DNA phosphodiesterase 1. | 0.434 |
| LOC101075827 | top1 | ENSTRUP00000017343 | ENSTRUP00000001369 | DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.670 |
| TOP2B | Fancm | ENSTRUP00000059112 | ENSTRUP00000024507 | DNA topoisomerase II beta. | ERCC4 domain-containing protein. | 0.574 |
| TOP2B | blm | ENSTRUP00000059112 | ENSTRUP00000078695 | DNA topoisomerase II beta. | BLM RecQ like helicase. | 0.707 |
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