Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c5h11orf88Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
gtf2b
General transcription factor IIB.
   
 0.878
taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.871
taf1
Transcription initiation factor TFIID subunit.
    
 0.870
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.870
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.869
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.867
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.863
ENSTRUP00000058542
General transcription factor IIA, 2.
   
 0.863
taf13
Transcription initiation factor TFIID subunit 13.
    
 0.862
bdp1
SANT domain-containing protein.
    
 0.860
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (8%) [HD]