STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078562Divergent protein kinase domain 1Ab. (403 aa)    
Predicted Functional Partners:
fam136a
Family with sequence similarity 136 member A.
      
 0.722
H2SVG6_TAKRU
Coiled-coil domain containing 126.
      
 0.714
c22h5orf22
Zgc:56556.
      
 0.548
tsku
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
    
 
 0.522
acss3
Acyl-CoA synthetase short chain family member 3.
      
 0.510
hsdl2
Hydroxysteroid dehydrogenase like 2.
      
 0.482
ugcg
UDP-glucose ceramide glucosyltransferase.
      
 0.476
LOC101066303
EF-hand domain family, member D1.
      
 0.462
pomt2
Protein-O-mannosyltransferase 2.
    
   0.418
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.