STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105416506Uncharacterized protein. (597 aa)    
Predicted Functional Partners:
LOC101067488
NTR domain-containing protein.
   
 0.947
LOC101063400
NTR domain-containing protein.
   
 0.947
c3
Uncharacterized protein.
   
 0.947
ENSTRUP00000050016
Hemicentin 2.
 
      0.889
fbln5
Fibulin 5.
 
   
 0.748
fkbp6
Peptidylprolyl isomerase.
    
  0.634
LOC115250255
Sperm-associated antigen 8-like.
    
   0.624
LOC101069540
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.621
LOC101064033
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.618
ENSTRUP00000074879
annotation not available
 
   
  0.589
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.