Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101074167WD_REPEATS_REGION domain-containing protein. (423 aa)    
Predicted Functional Partners:
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.996
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.995
lin52
Lin-52 DREAM MuvB core complex component.
   
 0.994
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.994
mybl2
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
   
 0.976
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 0.968
hat1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
   
 0.964
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.943
foxm1
Forkhead box M1.
   
 0.931
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.930
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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