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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074167WD_REPEATS_REGION domain-containing protein. (423 aa)    
Predicted Functional Partners:
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.993
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.993
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.991
lin52
Lin-52 DREAM MuvB core complex component.
   
 0.987
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.981
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 0.981
ENSTRUP00000064256
annotation not available
   
 0.981
Arid4b
Uncharacterized protein.
   
 0.981
hat1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
   
 0.973
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.969
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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