Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077507Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
    
 0.859
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.789
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 0.733
H2TLH5_TAKRU
Uncharacterized protein.
    
 0.718
myo9b
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.699
LOC101075743
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.699
myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.699
LOC101061902
Unconventional myosin-IXb-like isoform X1.
    
 0.699
sh3rf3
SH3 domain containing ring finger 3.
    
 0.628
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.516
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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