STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078202Tyrosine-protein kinase receptor. (581 aa)    
Predicted Functional Partners:
ENSTRUP00000063292
BDNF/NT-3 growth factors receptor-like isoform X1.
 
      0.898
LOC101069363
Neurotrophin 4; Belongs to the NGF-beta family.
    
 0.736
ENSTRUP00000087641
Neurotrophin-4-like.
    
 0.736
H2V4V2_TAKRU
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
   
 0.712
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.607
ENSTRUP00000008647
Receptor-type tyrosine-protein phosphatase S-like isoform X1.
   
 0.598
LOC101067188
Protein tyrosine phosphatase receptor type Sa.
   
 0.598
ENSTRUP00000071898
Uncharacterized protein.
   
 0.598
LOC101063084
Protein tyrosine phosphatase receptor type Fa.
   
 0.598
ENSTRUP00000078624
Uncharacterized protein.
   
 0.598
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.