Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc1a1Amino acid transporter. (501 aa)    
Predicted Functional Partners:
slc3a1
Solute carrier family 3 member 1.
   
 
 0.798
slc7a5
Solute carrier family 7 member 5.
   
 
 0.737
LOC101061314
Solute carrier family 7 member 1a.
   
 
 0.726
slc7a9
Solute carrier family 7 member 9.
   
 
 0.694
slc38a9
Solute carrier family 38 member 9.
      
 0.691
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.685
SLC6A19-2
Solute carrier family 6 member 19.
  
  
 0.685
arl6ip5
PRA1 family protein.
    
 
 0.670
LOC101069168
PRA1 family protein.
    
 
 0.670
slc38a11
Solute carrier family 38 member 11.
      
 0.628
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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