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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc1a1Amino acid transporter. (501 aa)    
Predicted Functional Partners:
slc3a1
Solute carrier family 3 member 1.
   
 
 0.629
slc38a9
Solute carrier family 38 member 9.
    
 
 0.625
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.595
SLC6A19-2
Solute carrier family 6 member 19.
  
  
 0.595
slc7a9
Solute carrier family 7 member 9.
   
  
 0.558
cltrn
Si:dkey-194e6.1.
      
 0.538
slc7a5
Solute carrier family 7 member 5.
   
  
 0.503
arl6ip5
PRA1 family protein.
    
 
 0.468
LOC101069168
PRA1 family protein.
    
 
 0.468
slc6a14
Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) isoform X1.
  
  
 0.460
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.