STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068730VANGL planar cell polarity protein 2. (525 aa)    
Predicted Functional Partners:
PRICKLE1
Prickle homolog 1a.
    
 0.974
prickle2
Prickle homolog 2b.
    
 0.973
LOC101071385
Uncharacterized protein.
    
 0.973
LOC101073257
Prickle homolog 2a.
    
 0.972
dvl2
Dishevelled segment polarity protein 2.
    
 0.972
dvl3
Dishevelled segment polarity protein 3a.
    
 0.967
dvl1
Dishevelled segment polarity protein 1a.
    
 0.967
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.796
fzd3
FZ domain-containing protein.
   
 0.767
ENSTRUP00000057963
annotation not available
    
 0.688
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.