STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsaCarboxypeptidase; Belongs to the peptidase S10 family. (490 aa)    
Predicted Functional Partners:
LOC101061169
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.806
glb1
Beta-galactosidase.
   
 0.806
neu1
Neuraminidase 1.
   
 0.756
LOC101065981
Sialidase 4.
    
 0.663
pebp1
Phosphatidylethanolamine binding protein 1.
   
 
 0.644
glb1l2
Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b.
   
 0.598
Bod1l1
Uncharacterized protein.
   
 0.598
LOC101065366
Stanniocalcin 2b.
   
 0.598
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.567
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.567
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.