Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ctsaCarboxypeptidase; Belongs to the peptidase S10 family. (490 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
   
 0.939
glb1
Beta-galactosidase.
   
 0.883
LOC101061169
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.869
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 0.723
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 
 0.716
LOC101076659
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.684
derl2
Derlin-2/3.
    
 
 0.677
LOC101070919
Cathepsin Bb; Belongs to the peptidase C1 family.
   
 0.674
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.644
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.644
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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