STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eral1Era-like 12S mitochondrial rRNA chaperone 1. (464 aa)    
Predicted Functional Partners:
dap3
Death associated protein 3.
    
 0.992
mrps16
Mitochondrial ribosomal protein S16.
   
 0.991
mrps7
Mitochondrial ribosomal protein S7.
    
 0.990
mrps22
Mitochondrial ribosomal protein S22.
    
 0.988
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.987
mrps10
Mitochondrial ribosomal protein S10.
  
 0.984
LOC101079165
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
    
 0.984
ENSTRUP00000049547
Mitochondrial ribosomal protein S6.
   
 0.984
ptcd3
Pentatricopeptide repeat domain 3.
    
 0.982
mrps5
28S ribosomal protein S5, mitochondrial.
  
 0.981
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.