casc3 protein (Takifugu rubripes) - STRING interaction network

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[Homology]

Score

casc3

Casc3 exon junction complex subunit. (740 aa)

Predicted Functional Partners:

rbm8a

0.996

eif4a3

0.971

LOC101074452

0.966

LOC101077614

0.921

LOC101064659

0.868

UPF1

0.868

upf3b

0.855

UPF2

0.843

upf3a

0.836

dhx38

0.779

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101064659	LOC101074452	ENSTRUP00000000308	ENSTRUP00000078039	Uncharacterized protein.	Mago homolog, exon junction complex subunit.	0.747
LOC101064659	UPF1	ENSTRUP00000000308	ENSTRUP00000012294	Uncharacterized protein.	Putative regulator of nonsense transcripts 1; RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an rent1-rent2-rent3 surveillance complex is believed to activate NMD (By similarity).	0.900
LOC101064659	UPF2	ENSTRUP00000000308	ENSTRUP00000018623	Uncharacterized protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.998
LOC101064659	casc3	ENSTRUP00000000308	ENSTRUP00000001608	Uncharacterized protein.	Casc3 exon junction complex subunit.	0.868
LOC101064659	dhx38	ENSTRUP00000000308	ENSTRUP00000075712	Uncharacterized protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.523
LOC101064659	eif4a3	ENSTRUP00000000308	ENSTRUP00000029160	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.829
LOC101064659	rbm8a	ENSTRUP00000000308	ENSTRUP00000033509	Uncharacterized protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.946
LOC101064659	upf3a	ENSTRUP00000000308	ENSTRUP00000073483	Uncharacterized protein.	UPF3A regulator of nonsense mediated mRNA decay.	0.980
LOC101064659	upf3b	ENSTRUP00000000308	ENSTRUP00000026872	Uncharacterized protein.	UPF3B regulator of nonsense mediated mRNA decay.	0.990
LOC101074452	LOC101064659	ENSTRUP00000078039	ENSTRUP00000000308	Mago homolog, exon junction complex subunit.	Uncharacterized protein.	0.747
LOC101074452	LOC101077614	ENSTRUP00000078039	ENSTRUP00000079531	Mago homolog, exon junction complex subunit.	TPR_REGION domain-containing protein.	0.932
LOC101074452	UPF1	ENSTRUP00000078039	ENSTRUP00000012294	Mago homolog, exon junction complex subunit.	Putative regulator of nonsense transcripts 1; RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an rent1-rent2-rent3 surveillance complex is believed to activate NMD (By similarity).	0.747
LOC101074452	UPF2	ENSTRUP00000078039	ENSTRUP00000018623	Mago homolog, exon junction complex subunit.	UPF2 regulator of nonsense mediated mRNA decay.	0.869
LOC101074452	casc3	ENSTRUP00000078039	ENSTRUP00000001608	Mago homolog, exon junction complex subunit.	Casc3 exon junction complex subunit.	0.966
LOC101074452	dhx38	ENSTRUP00000078039	ENSTRUP00000075712	Mago homolog, exon junction complex subunit.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.795
LOC101074452	eif4a3	ENSTRUP00000078039	ENSTRUP00000029160	Mago homolog, exon junction complex subunit.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.996
LOC101074452	rbm8a	ENSTRUP00000078039	ENSTRUP00000033509	Mago homolog, exon junction complex subunit.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
LOC101074452	upf3a	ENSTRUP00000078039	ENSTRUP00000073483	Mago homolog, exon junction complex subunit.	UPF3A regulator of nonsense mediated mRNA decay.	0.988
LOC101074452	upf3b	ENSTRUP00000078039	ENSTRUP00000026872	Mago homolog, exon junction complex subunit.	UPF3B regulator of nonsense mediated mRNA decay.	0.993
LOC101077614	LOC101074452	ENSTRUP00000079531	ENSTRUP00000078039	TPR_REGION domain-containing protein.	Mago homolog, exon junction complex subunit.	0.932