STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cacng4Calcium channel, voltage-dependent, gamma subunit 4a. (329 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.850
LOC101069694
Calcium channel, voltage-dependent, R type, alpha 1E subunit b.
   
 
 0.794
LOC101068297
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 
 0.789
H2UVZ3_TAKRU
Protein kinase domain-containing protein.
   
 
 0.789
LOC101071995
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2; Belongs to the protein kinase superfamily.
   
 
 0.744
LOC101075022
Calcium channel, voltage-dependent, gamma subunit 8a.
  
 
 
0.726
LOC101080049
Calcium channel, voltage-dependent, gamma subunit 8b.
  
 
 
0.726
LOC101071993
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
     
 0.705
shisa9
Protein shisa-9 isoform X1.
     
 0.696
LOC101065285
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a.
   
 
 0.694
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.