STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gnb1Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (347 aa)    
Predicted Functional Partners:
LOC101070134
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.995
LOC101072412
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.993
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.987
LOC101079163
Rhodopsin.
   
 0.966
LOC619285
Rhodopsin.
   
 0.965
LOC778011
Rhodopsin.
   
 0.965
rho
Rhodopsin.
   
 0.965
LOC101080113
Regulator of G protein signaling 9a.
   
 0.963
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
     
 0.942
ENSTRUP00000079406
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha-like.
   
 
 0.936
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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