STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam20c3FAM20C3. (546 aa)    
Predicted Functional Partners:
fam20a
FAM20A.
    
 0.816
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.710
LOC101061209
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.707
fam20b
FAM20B.
    
  0.682
ckap4
Uncharacterized protein.
    
 0.599
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
    
 0.570
penk
Proenkephalin a.
    
 0.570
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
  0.563
bmp15
Bone morphogenetic protein 15.
    
  0.563
fstl3
Follistatin-like 3 (secreted glycoprotein).
     
 0.547
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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