STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
st8sia3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3; Belongs to the glycosyltransferase 29 family. (371 aa)    
Predicted Functional Partners:
Fech
Protoporphyrin/coproporphyrin ferrochelatase.
      
 0.700
onecut2
One cut domain family member.
      
 0.571
WDR7
WD repeat domain 7.
      
 0.549
LOC101075189
Calcium channel, voltage-dependent, beta 2b.
   
  
 0.543
CCNG2
Cyclin G2; Belongs to the cyclin family.
      
 0.540
LOC101077778
Cyclin G2; Belongs to the cyclin family.
      
 0.540
ENSTRUP00000084402
Cyclin G2.
      
 0.540
ugcg
UDP-glucose ceramide glucosyltransferase.
      
 0.514
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
      
 0.475
mgat4c
Mgat4 family member C.
      
 0.440
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.