patl1 protein (Takifugu rubripes) - STRING interaction network

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[Homology]

Score

patl1

PAT1 homolog 1, processing body mRNA decay factor. (829 aa)

Predicted Functional Partners:

LOC101069239

0.962

lsm7

0.943

edc3

0.937

dcp1a

0.936

lsm4

0.933

Dcp2

0.933

lsm5

0.914

ddx6

0.914

lsm6

0.914

LOC101070680

0.914

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dcp2	LOC101069239	ENSTRUP00000069446	ENSTRUP00000065009	DCP2 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.976
Dcp2	LOC101070680	ENSTRUP00000069446	ENSTRUP00000056299	DCP2 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.971
Dcp2	dcp1a	ENSTRUP00000069446	ENSTRUP00000008058	DCP2 domain-containing protein.	Decapping mRNA 1A.	0.999
Dcp2	ddx6	ENSTRUP00000069446	ENSTRUP00000053816	DCP2 domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.971
Dcp2	edc3	ENSTRUP00000069446	ENSTRUP00000043754	DCP2 domain-containing protein.	Enhancer of mRNA decapping 3 homolog (S. cerevisiae).	0.999
Dcp2	lsm4	ENSTRUP00000069446	ENSTRUP00000048509	DCP2 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
Dcp2	lsm5	ENSTRUP00000069446	ENSTRUP00000045498	DCP2 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.793
Dcp2	lsm6	ENSTRUP00000069446	ENSTRUP00000055779	DCP2 domain-containing protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.766
Dcp2	lsm7	ENSTRUP00000069446	ENSTRUP00000051649	DCP2 domain-containing protein.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.875
Dcp2	patl1	ENSTRUP00000069446	ENSTRUP00000001706	DCP2 domain-containing protein.	PAT1 homolog 1, processing body mRNA decay factor.	0.933
LOC101069239	Dcp2	ENSTRUP00000065009	ENSTRUP00000069446	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	DCP2 domain-containing protein.	0.976
LOC101069239	LOC101070680	ENSTRUP00000065009	ENSTRUP00000056299	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.950
LOC101069239	dcp1a	ENSTRUP00000065009	ENSTRUP00000008058	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Decapping mRNA 1A.	0.865
LOC101069239	ddx6	ENSTRUP00000065009	ENSTRUP00000053816	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.950
LOC101069239	edc3	ENSTRUP00000065009	ENSTRUP00000043754	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Enhancer of mRNA decapping 3 homolog (S. cerevisiae).	0.941
LOC101069239	lsm4	ENSTRUP00000065009	ENSTRUP00000048509	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LOC101069239	lsm5	ENSTRUP00000065009	ENSTRUP00000045498	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LOC101069239	lsm6	ENSTRUP00000065009	ENSTRUP00000055779	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
LOC101069239	lsm7	ENSTRUP00000065009	ENSTRUP00000051649	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LOC101069239	patl1	ENSTRUP00000065009	ENSTRUP00000001706	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	PAT1 homolog 1, processing body mRNA decay factor.	0.962