STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bend5ATP/GTP binding protein-like 4. (525 aa)    
Predicted Functional Partners:
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.763
etv6
Uncharacterized protein.
      
 0.727
lratd1
LRAT domain containing 1.
      
 0.708
slc22a16
Uncharacterized protein.
      
 0.704
ENSTRUP00000054854
Uncharacterized protein.
    
 
 0.653
sh3rf3
SH3 domain containing ring finger 3.
      
 0.622
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.580
elavl4
ELAV-like protein; Belongs to the RRM elav family.
      
 0.570
crbn
Cereblon.
      
 0.544
wdr17
WD repeat domain 17.
   
  
 0.536
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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