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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071062Sprouty related EVH1 domain containing 2a. (427 aa)    
Predicted Functional Partners:
nek2
NIMA-related kinase 2.
    
 0.754
LOC101069736
Zgc:55558.
   
 0.575
hras
HRas proto-oncogene, GTPase a.
   
 0.575
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.575
CSDE1
Cold shock domain containing E1, RNA-binding.
   
 0.575
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
 0.539
LOC101079195
V-ral simian leukemia viral oncogene homolog Ba (ras related).
   
 0.537
rala
V-ral simian leukemia viral oncogene homolog Aa (ras related).
   
 0.537
LOC101065425
Uncharacterized protein.
   
 0.537
LOC115253205
PiggyBac transposable element-derived protein 4-like.
   
 0.537
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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