STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2RNL9_TAKRUHeat shock transcription factor 4. (289 aa)    
Predicted Functional Partners:
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.875
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.875
hsbp1
Heat shock factor binding protein 1a.
    
 0.817
LOC101070860
TSC complex subunit 1b.
    
 0.807
H2UCW4_TAKRU
TSC complex subunit 1.
    
 0.807
LOC101075813
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
    
 0.782
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
   
 0.771
hspbp1
HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.
   
 
 0.754
sirt1
Sirtuin 1.
   
 0.754
LOC101071708
Uncharacterized protein.
    
 0.746
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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