STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNOCyclin O. (321 aa)    
Predicted Functional Partners:
foxn4
Forkhead box N4.
    
 0.776
mcidas
Multicilin.
 
 
  
 0.775
LOC101063487
Cell division cycle 20 homolog.
   
 0.739
ENSTRUP00000069968
annotation not available
   
 0.739
plk4
Polo-like kinase 4 (Drosophila).
   
 0.736
jtb
Jumping translocation breakpoint.
      
 0.700
cdc27
Cell division cycle 27.
   
 0.681
LOC101076451
Fizzy/cell division cycle 20 related 1b.
   
 0.673
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.673
intu
Inturned planar cell polarity protein.
   
 0.670
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.