smn protein (Takifugu rubripes) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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[Homology]

Score

smn

Tudor domain-containing protein. (278 aa)

Predicted Functional Partners:

gemin7

0.989

gemin8

0.989

gemin4

0.985

gemin2

0.979

snrpd1

0.972

snrpg

0.963

snrpd2

0.962

snrpd3

0.962

LOC101073509

0.945

DDX20

0.945

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX20	gemin2	ENSTRUP00000068970	ENSTRUP00000082677	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.938
DDX20	gemin4	ENSTRUP00000068970	ENSTRUP00000027062	Probable ATP-dependent RNA helicase DDX20.	Gem (nuclear organelle) associated protein 4.	0.992
DDX20	gemin7	ENSTRUP00000068970	ENSTRUP00000029365	Probable ATP-dependent RNA helicase DDX20.	Gem (nuclear organelle) associated protein 7.	0.972
DDX20	gemin8	ENSTRUP00000068970	ENSTRUP00000056191	Probable ATP-dependent RNA helicase DDX20.	Gem (nuclear organelle) associated protein 8.	0.971
DDX20	smn	ENSTRUP00000068970	ENSTRUP00000001768	Probable ATP-dependent RNA helicase DDX20.	Tudor domain-containing protein.	0.945
DDX20	snrpd1	ENSTRUP00000068970	ENSTRUP00000022569	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.754
DDX20	snrpd2	ENSTRUP00000068970	ENSTRUP00000071624	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein Sm D2.	0.891
DDX20	snrpd3	ENSTRUP00000068970	ENSTRUP00000072646	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein Sm D3.	0.741
DDX20	snrpg	ENSTRUP00000068970	ENSTRUP00000009580	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein G.	0.848
LOC101073509	gemin2	ENSTRUP00000049681	ENSTRUP00000082677	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.938
LOC101073509	gemin4	ENSTRUP00000049681	ENSTRUP00000027062	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 4.	0.992
LOC101073509	gemin7	ENSTRUP00000049681	ENSTRUP00000029365	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 7.	0.972
LOC101073509	gemin8	ENSTRUP00000049681	ENSTRUP00000056191	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 8.	0.971
LOC101073509	smn	ENSTRUP00000049681	ENSTRUP00000001768	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Tudor domain-containing protein.	0.945
LOC101073509	snrpd1	ENSTRUP00000049681	ENSTRUP00000022569	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.754
LOC101073509	snrpd2	ENSTRUP00000049681	ENSTRUP00000071624	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D2.	0.891
LOC101073509	snrpd3	ENSTRUP00000049681	ENSTRUP00000072646	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D3.	0.741
LOC101073509	snrpg	ENSTRUP00000049681	ENSTRUP00000009580	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein G.	0.848
gemin2	DDX20	ENSTRUP00000082677	ENSTRUP00000068970	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Probable ATP-dependent RNA helicase DDX20.	0.938
gemin2	LOC101073509	ENSTRUP00000082677	ENSTRUP00000049681	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.938